CDS

Accession Number TCMCG016C11229
gbkey CDS
Protein Id OMO82266.1
Location join(23397..23570,23711..23843,24040..24107,24199..24300,24478..24630,24713..24790,25240..25365,25465..25567,26019..26119,26238..26375,26456..26599,26768..26843,27325..27410,27504..27629,27795..27902)
Organism Corchorus capsularis
locus_tag CCACVL1_11998

Protein

Length 571aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010035.1
Definition hypothetical protein CCACVL1_11998 [Corchorus capsularis]
Locus_tag CCACVL1_11998

EGGNOG-MAPPER Annotation

COG_category U
Description Signal recognition particle 54 kDa
KEGG_TC 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9
KEGG_Module M00335        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K03106        [VIEW IN KEGG]
EC 3.6.5.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko02024        [VIEW IN KEGG]
ko03060        [VIEW IN KEGG]
ko03070        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
map03070        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051291        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070206        [VIEW IN EMBL-EBI]
GO:0070208        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGCAATGCAATTTTCAACCGTTGCTTCCCGCCATTTCTCGGCTACTTCAGGTTCCTTTCCGACGAACCGGAAGTTCTACAACAGTCCCAGAAACTCAACTAAACTCGGCAGTTCTTGGAATAGTGGTTCCGGCAATGTCACTTCTCTTTCGTCGAGGAATTTGTTCACTAGAGAGATATGGGGATGGGTGAATTCCAAGACGGTTACTTTTAAGAGAGATATGCGAGGTGTTGTAAGAGCTGAAATGTTTGGACAATTGACAAGTGGTCTCGAATCTGCATGGACCAAGCTTAAAGGAGAAGAGGTTTTGACAAAGGAGAATATTGTGGAGCCAATGCGCGATATTAGGAGAGCCCTTTTGGAAGCAGATGTGAGTCTTCCTGTTGTCAGAAGGTTTGTCCAAGCTGTAAGCGATCAGGCTGTGGGAACTGGCCTTATTCGAGGAGTGAAGCCGGATGAACAATTGGTCAAGATCGTTCATGATGAGCTCGTGAAATTGATGGGAGGAGAGGTTTCTGAACTGGTTTTTTCAAAATCTGGCCCCACTGTTATATTATTGGCTGGTCTTCAAGGAGTTGGAAAGACAACTGTTTGTGCAAAGTTAGCTAATTATCTTAAGAAACAGGGTAAGAGTAGCATGCTCATTGCAGGAGATGTTTACAGACCTGCTGCTATTGATCAACTTGTTATCTTGGGTGAACAGGTAGGTGTACCTGTTTATACAGCAGGGACTGAGGTTAAACCATCTGACATAGCAAGGCAAGGTTTAGAAGAGGCCAAAAAGAAGAAGATAGATGTAGTGATAATGGATACTGCAGGAAGACTCCAGATAGATAAAGCAATGATGGATGAGTTAAAAGAAGTGAAAAAAGTTCTTAAACCCACAGAAGTTTTGCTGGTCGTGGATGCAATGACTGGCCAAGAAGCTGCTGCCTTGGTCACAACATTTAACGTTGAGATAGGGATTACCGGTGCCATTTTGACAAAGCTAGATGGGGATTCTAGAGGTGGTGCAGCTTTGAGTGTTAAAGAGGTTTCTGGGAAGCCAATTAAGCTTGTAGGGCGTGGAGAGCGCATGGAGGACCTCGAACCTTTCTATCCAGATCGTATGGCTGGACGCATCTTGGGAATGGGGGATGTCCTCACATTTGTTGAGAAGGCACAAGAAGTTATGCGCCAAGAAGATGCTGAAGATTTGCAGAAGAAGATCATGAGTGCAAAGTTTGACTTCAATGATTTCCTAAAGCAGACTCGTGCTGTTGCACGGATGGGTTCCATGACTCGTGTCATTGGAATGATCCCTGGAATGGGGAAGGTTACCCCAGCCCAAGTTCGAGAAGCAGAGAAGAGTTTAAAGATAATGGAGGCAATGATTGAAGCCATGACACCAGAGGAAAGGGAGAAGCCAGAGTTATTGGCTGAGTCGCCTGAAAGGAGGAAAAGAATTGCTCAAGCTTCTGGTAAAACAGAGCAGCAGGTGAGTCAACTTGTTGCTCAACTGTTCCAAATGCGCGTACGCATGAAGAATCTGATGGGAGTAATGGAAGGTGGATCTATGCCAACATTGAGCAATCTTGAGGATGCAATGAAAGCAGAACAAAAGGCTCCTCCTGGCACTGCAAGAAGAAAGAAAAAAGCAGAGTCAAGAAGGCAGTTTGCAAACTCATCATCGACAAGACCTAGTCCTCGTGGTTTTGGTGCAAAGGATTAG
Protein:  
MEAMQFSTVASRHFSATSGSFPTNRKFYNSPRNSTKLGSSWNSGSGNVTSLSSRNLFTREIWGWVNSKTVTFKRDMRGVVRAEMFGQLTSGLESAWTKLKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVGTGLIRGVKPDEQLVKIVHDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSSMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIARQGLEEAKKKKIDVVIMDTAGRLQIDKAMMDELKEVKKVLKPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLTFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPERRKRIAQASGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMPTLSNLEDAMKAEQKAPPGTARRKKKAESRRQFANSSSTRPSPRGFGAKD